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Book and book chapters:

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  1. "Euclide - Ottica - Immagini di una teoria della visione” F. Incardona (Di Renzo, Roma 1996 – 2nd  edition 2011 - ISBN: 9788883232626)

  2. “Mobi-dev: Mobile devices for healthcare applications”, Roberto Altieri, Francesca Incardona, Harris Kirkilis, Roberto Ricci, within the book “M-Health - Emerging Mobile Health Systems”, Springer US 2006, p. 163-175, Hardcover ISBN: 0-387-26558-9

  3.  “Future challenges and recommendations”, Val Jones, Francesca Incardona, Clive Tristram, Salvatore Virtuoso, Andreas Lymberis, within the book “M-Health - Emerging Mobile Health Systems”, Springer US 2006, p. 267-270, Hardcover ISBN: 0-387-26558-9

 

 

Papers:

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  1. "Three-dimensional localization system for small magnetic dipoles" F. Incardona, L. Narici, I. Modena, S.N. Erné, Rev. Sci. Instrum. 63 (9) September 1992

  2. “How much are homologous peptides homologous?” Incardona F, Morante S, Parisi V, Rossi GC. J Theor Biol. 1995 Aug 21;175(4):437-55. PMID: 7475084

  3. "Scienza tecnologia e filosofia nel periodo alessandrino" F. Incardona in Nuova Secondaria, 89 (10) June 1997

  4. "Gli "antichi" e la prospettiva" F. Incardona in Nuova Secondaria, 84 (7) March 1998

  5. “EuResist: Integrating and exchanging European HIV data”, Y. Peres, T. Bergroth, J. Denholm-Price, F. Incardona, R. Kaiser et al., in: European Journal of Medical Research (August 16, 2007).

  6. “EuResist: European data – European Interpretation Systems”, M. Rosen-Zvi, E. Aharoni, A. Altmann, R. Kaiser, T. Lengauer, H. Neuvirth, M. Prosperi, F. Bazsó, F. Incardona, M. Zazzi, in: European Journal of Medical Research (August 16, 2007).

  7.  “Selecting anti-HIV therapies based on a variety of genomic and clinical factors”, M. Rosen-Zvi, A Altmann, M Prosperi, E Aharoni, H Neuvirth, A Sonnerborg, E Schuelter, D Struck, Y Peres, F Incardona, R Kaiser, M Zazzi  and T Lengauer, Bioinformatics. 2008 Jul 1;24(13):i399-406. PMID: 18586740

  8. “Antiretroviral treatment response prediction engines at work: the EuResist project", M. Zazzi, F. Incardona. Editorial in "Reviews in Antiviral Therapy", Innovations, volume 2008_2.

  9.  “Stochastic modelling of genotypic drug-resistance for human immunodeficiency virus towards long-term combination therapy optimization.” Prosperi MC, D'Autilia R, Incardona F, De Luca A, Zazzi M, Ulivi G. Bioinformatics. 2009 Apr 15;25(8):1040-7. Epub 2008 Oct 31. PMID: 18977781

  10.  “Comparison of classifier fusion methods for predicting response to anti HIV-1 therapy.” Altmann A, Rosen-Zvi M, Prosperi M, Aharoni E, Neuvirth H, Schülter E, Büch J, Struck D, Peres Y, Incardona F, Sönnerborg A, Kaiser R, Zazzi M, Lengauer T. PLoS One. 2008;3(10):e3470. Epub 2008 Oct 21. PMID: 18941628

  11. “Advantages of predicted phenotypes and statistical learning models in inferring virological response to antiretroviral therapy from HIV genotype.” Altmann A, Sing T, Vermeiren H, Winters B, Van Craenenbroeck E, Van der Borght K, Rhee SY, Shafer RW, Schülter E, Kaiser R, Peres Y, Sönnerborg A, Fessel WJ, Incardona F, Zazzi M, Bacheler L, Van Vlijmen H, Lengauer T. Antivir Ther. 2009;14(2):273-83. PMID: 19430102

  12. “Only slight impact of predicted replicative capacity for therapy response prediction” Weisser H., Altmann A., Sierra S., Incardona F., Struck D., Sönnerborg, A., Kaiser R., Zazzi M., Tschochner M., Walter H., Lengauer T., PLoSOne 5, 2 (2010) e9044.

  13. “Expanding the world’s largest HIV drug resistance database, EuResist, into an African context”, F. Incardona, Tropical Medicine and International Health doi:10.1111/j.1365-3156.2010.02571. volume 15 no 8 pp s1–s32 august 2010

  14. “Prediction of response to antiretroviral therapy by human experts and by the EuResist data-driven expert system (the EVE study).” Zazzi M, Kaiser R, Sönnerborg A, Struck D, Altmann A, Prosperi M, Rosen-Zvi M, Petroczi A, Peres Y, Schülter E, Boucher CA, Brun-Vezinet F, Harrigan PR, Morris L, Obermeier M, Perno CF, Phanuphak P, Pillay D, Shafer RW, Vandamme AM, van Laethem K, Wensing AM, Lengauer T, Incardona F. HIV Med. 2010 Aug 19. [Epub ahead of print] PMID: 20731728

  15. “The EuResist expert model for customised HAART optimisation: 2010 update and extension to newest compounds”, Alejandro Pironti, A Sönnerborg, Maurizio Zazzi, Rolf Kaiser, Daniel Struck, Bonaventura Clotet, ÀM Vandamme, Francesca Incardona, Thomas Lengauer, Michal Rosen-Zvi, Mattia Prosperi, Journal of the International AIDS Society, 2010/11/8, 13/Suppl 4

  16. “Comparison of HIV-1 Genotypic Resistance Test Interpretation Systems in Predicting Virological Outcomes Over Time.” Frentz D, Boucher CA, Assel M, De Luca A, Fabbiani M, Incardona F, Libin P, Manca N, Müller V, Nualláin BO, Paredes R, Prosperi M, Quiros-Roldan E, Ruiz L, Sloot PM, Torti C, Vandamme AM, Van Laethem K, Zazzi M, van de Vijver DA. PLoS One 2010;5:e11505.

  17. “Development of a cross-European virtual sample repository and HIV resistance database”, J Kjaer, DK Kristensen, G Beheydt, S Imbrechts, M Rickenbach, I Fanti, F Incardona, Annemie Vandamme, J. Antiviral Therapy 2011 16/4

  18.  “Predicting Response to Antiretroviral Treatment by Machine Learning: The EuResist Project” Maurizio Zazzi, Francesca Incardona, Michal Rosen-Zvi, Mattia Prosperi, Thomas Lengauer, Andre Altmann, Anders Sonnerborg, Tamar Lavee, Eugen Schülter, Rolf Kaiser, Intervirology Vol. 55, No. 2, 2012.

  19. “History-alignment models for bias-aware prediction of virological response to HIV combination therapy”, Jasmina Bogojeska, Daniel Stockel, Maurizio Zazzi, Rolf Kaiser, Francesca Incardona, Michal Rosen-Zvi, Thomas Lengauer JMLR W&CP 22: 118-126, AISTATS 2012.

  20. “Standardized representation, visualization and searchable repository of antiretroviral treatment-change episodes”. Rhee SY, Blanco JL, Liu TF, Pere I, Kaiser R, Zazzi M, Incardona F, Towner W, Gatell J, De Luca A, Fessel WJ, Shafer RW. AIDS Res Ther. 2012 May 3;9(1):13. [Epub ahead of print]

  21. “Etravirine in protease inhibitor-free antiretroviral combination therapies”, E Schuelter, N Luebke, B Jensen, M Zazzi, A Sönnerborg, T Lengauer, F Incardona, R Camacho, J Schmit, B Clotet, R Kaiser, A Pironti, Journal of the International AIDS Society, 15/6, 2012/11/11

  22. “HIV-1 fitness landscape models for indinavir treatment pressure using observed evolution in longitudinal sequence data are predictive for treatment failure”, R Z Sangeda, K Theys, G Beheydt, S-Y Rhee, K Deforche, J Vercauteren, P Libin, S Imbrechts, Z Grossman, R Camacho, K Van Laethem, A Pironti, M Zazzi, A Sönnerborg, F Incardona, A De Luca, C Torti, L Ruiz, D AMC Vijver, R W Shafer, B Bruzzone, E Van Wijngaerden, A-M Vandamme, Infection, Genetics and Evolution, 2013/3/21

  23. Efficacy of etravirine combined with darunavir or other ritonavir-boosted protease inhibitors in HIV-1-infected patients: an observational study using pooled European cohort data. J Vingerhoets, V Calvez, P Flandre, A‐G Marcelin, F Ceccherini‐Silberstein, C‐F Perno, M Mercedes Santoro, R Bateson, M Nelson, A Cozzi‐Lepri, [......], F Incardona, A Sonnerborg, B Clotet, R Paredes,HF Günthard, B Ledergerber, A Hoogstoel, S Nijs, L Tambuyzer, L Lavreys, M Opsomer. HIV Medicine 02/2015.

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Proceedings:

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  1. "Fast positioning system for a multichannel biomagnetic detector" F. Incardona, S.N.Erné, I. Modena, L.Narici, VII International Conference on Biomagnetism - Book of abstracts

  2. “Internet for healthcare: some examples”, II International Epes Forum, Libro de ponencias, Malaga, 1999

  3. "Phisicians and mobile devices: requirements and options" F. Incardona, presentation at International Trade Fair - Telemedicine and telecare, Luxembourg, April 2002

  4. "A SME Perspective" F. Incardona, presentation at "4 SME Technology Days", Leeds, September 2002

  5. "Mobi-Dev: sistema mobile per applicazioni in medicina", F. Incardona, presentation at "III Congresso AITIM su Telemedicina e informatica medica: applicazioni e sinergie con bioinformatica e neuroinformatica", Firenze, October 2002

  6. "Notes on the Symposium" F. Incardona and "Mobi-dev" S. Filippone, F. Incardona, presentations at "Symposium on Handheld devices for Healthcare", Roma, May 2003

  7. “Euresist project” Poster and oral presentation at ICT for Bio conference, Brussels 29-30/06/2006

  8. “Integration of viral genomics with clinical data to predict response to anti-HIV treatment” , E. Aharoni, A. Altmann, G. Borgulya, R. D’Autilia, F. Incardona, R. Kaiser, C. Kent, T. Lengauer, H. Neuvirth, Y. Peres, A. Petroczi, M. Prosperi, M. Rosen-Zvi, E. Schuelter, T. Sing, A. Sonnerborg, R. Thompson, M. Zazzi, IST Africa Conference Proceedings, Paul Cunningham and Miriam Cunningham (Eds), IIMC International Information Management Corporation, 2007, ISBN: 1-905824-04-1.

  9. “EuResist: An integrated system for management of antiretroviral drug resistance”, e-session and poster, The World of Health IT Conference & Exhibition, Vienna, Austria 22-25 October 2007

  10. “EuResist: exploration of multiple modeling techniques for prediction of response to treatment”, Maurizio Zazzi, Ehud Aharoni, Andre Altmann, F Baszó, Penny Bidgood, Gabór Borgulya, J Denholm-Prince, M Fielder, C Kent, T Lengauer, T Nepusz, H Neuvirth, Y Peres, A Petroczi, M Prosperi, L Romano, M Rosen-Zvi, E Schülter, T Sing, A Sönnerborg, R Thompson, G Ulivi, L Zalány, F Incardona, Proceedings of the 5th European HIV Drug Resistance Workshop 2007

  11. Expanding the world’s largest HIV drug resistance database, EuResist, into an African context (Talk), F. Incardona, E. Aris, M. Janabi, A. Swai., F. Mugusi, M. Bakari, T. Nagu, S. Mugusi, D. Mloka, A. Wondwossen, L. Lindquist, A. Sönnerborg, M. Zazzi, R. Kaiser, T. Lengauer, M. Prosperi, A. Altmann, E. Sandstrom, 5th EDCTP Forum, Arusha (Tanzania), 2009.

  12. The EuResist expert model for customised HAART optimisation: 2010 update and extension to newest compounds Pironti A, Sönnerborg A, Zazzi M, Kaiser R, Struck D, Clotet B, Vandamme AM, Incardona F, Lengauer T, Rosen-Zvi T, Prosperi M Tenth International Congress on Drug Therapy in HIV Infection. Glasgow, UK, 7-11 November 2010.

  13. Declining differences in treatment outcome among different patient categories in Europe, 1992-2010 Rosen-Zvi M1, Zazzi M2, Incardona F 3, Aaroni E1, Kaiser R 4, Lengauer T 5, Camacho R6, Clotet B 7, Vandamme AM8, Schmit JC9 , Sönnerborg A10 - for the EuResist Network 9th European Workshop on HIV & Hepatitis - Treatment Strategies & Antiviral Drug Resistance, Cyprus, 23-25 March 2011

  14. Training and strategy for HIV drug resistance testing in Eastern Africa - Maurizio Zazzi, Genny Meini, Arthur Emary, Nigus Fikrie, Silvia Kadima, Ezekiel Marandu, Doreen Mloka, Sabina Mugusi, Stephen Mutuku, Washington Njogu, Amare Worku, Muhammad Bakari, Daniel Fekade, Ferdinand Mugusi, Matilu Mwau, Mario Toti, Francesca Incardona, Anders Sonnerborg. Sixth EDCTP Forum, 9-12 October 2011, Addis Ababa, Ethiopia

  15. Etravirine in protease inhibitor-free antiretroviral combination terapie, Schuelter, E; Luebke, N; Jensen, B; Zazzi, M; Sönnerborg, A; Lengauer, T; Incardona, F; Camacho, R; Schmit, J; Clotet, B; Kaiser, R*; Pironti, A, HIV Drug Therapy Glasgow 2012

  16.  Virological responses in HIV-1-infected patients treated with etravirine combined with a boosted protease inhibitor other than darunavir/ritonavir: an observational study using pooled European cohort data Vincent Calvez, Anne-Geneviève Marcelin, Philippe Flandre; Francesca Ceccherini-Silberstein, Maria Mercedes Santoro, Carlo-Federico Perno; Mark Nelson, Ruth Bateson; Alessandro Cozzi-Lepri, Jesper Grarup, Jens Lundgren; Rolf Kaiser, Francesca Incardona, Anders Sonnerborg; Roger Paredes, Bonaventura Clotet; Huldrych Günthard, Bruno Ledergerber; Johan Vingerhoets, Annemie Hoogstoel, Steven Nijs, Lotke Tambuyzer, Ludo Lavreys, Magda Opsomer, 14th European AIDS Conference, Brussels, Belgium, 16–19 October 2013

  17. Structured Proportional Jump Processes, Tal El-Hay, Omer Weissbrod, Elad Eban, Maurizio Zazzi, Francesca Incardona, Proceedings of the UAI Conf - Aug 2014

  18. Predicting human-immunodeficiency virus rebound after therapy initiation/switch using genetic, laboratory, and clinical data, Mattia Prosperi, Alejandro Pironti, Francesca Incardona, Giuseppe Tradigo, Maurizio Zazzi - BCB '16 Proceedings of the 7th ACM International Conference on Bioinformatics, Computational Biology, and Health Informatics - 2016, Pages 611-615

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